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If you have not already installed certificates on the Microsoft Lync Server 2010 or Microsoft Lync Server 2013 as part of the Microsoft Lync deployment you can use the following procedure to create a custom template that includes the attributes required by AE Services and then specify this template during the Certificate Assignment phase of the Lync Server deployment.
If the Microsoft Lync Server deployment has been previously completed, use this procedure to re-run Step 3 of the Microsoft Lync Deployment Wizard so the Lync Server will have a certificate that includes the Application Policies required by AE Services. Care must be taken to ensure the template used and the issuing server satisfies all trust management needs of the Microsoft Lync Environment.
While installing the trusted certificate, note that Microsoft Lync Server and AE Services must either use the same CA or an issuer in the same certificate chain.